---
file_transformation: 
  # transcription start region (Sequence Ontology transcription_start_cluster), Wm82.gnm2
  cat original/TSR_annotated.V2.gff3 |
    perl -pe 's/^Chr(\d+)/glyma.Wm82.gnm2.Gm$1/; 
              s/TSR/transcription_start_cluster/; 
              s/.Wm82.a2.v1//' > Wm82.gnm2.trnsc.Wang_Duan_2024/glyma.Wm82.gnm2.trnsc.Wang_Duan_2024.tsr.gff3

  # transcription start site (Sequence Ontology TSS), Wm82.gnm2
  cat original/TSS_annotated.V2.gff3 |
    perl -pe 's/^Chr(\d+)/glyma.Wm82.gnm2.Gm$1/; 
              s/.Wm82.a2.v1//' > Wm82.gnm2.trnsc.Wang_Duan_2024/glyma.Wm82.gnm2.trnsc.Wang_Duan_2024.tss.gff3

 
changes: 
  - 2024-07-04 Initial preparation for datastore.