---
- name: arahy.Tifrunner.gnm2.ann2.PVFB.cds_lowqual.fna.gz
  description: CDS sequences; low confidence
  prior_names:
   - arahy.Tifrunner.gnm2.ann2.cds_lowqual.fna.gz
- name: arahy.Tifrunner.gnm2.ann2.PVFB.cds.fna.gz
  description: CDS sequences
  applications:
   - blast
   - mines
  prior_names:
   - arahy.Tifrunner.gnm2.ann2.cds.fna.gz
- name: arahy.Tifrunner.gnm2.ann2.PVFB.featid_map.tsv.gz
  description: Hash file of old/new gene IDs
- name: arahy.Tifrunner.gnm2.ann2.PVFB.gene_models_lowqual.gff3.gz
  description: MISSING
- name: arahy.Tifrunner.gnm2.ann2.PVFB.gene_models_main.bed.gz
  description: BED-format file, derived from gene_models_main.gff3
- name: arahy.Tifrunner.gnm2.ann2.PVFB.gene_models_main.gff3.gz
  description: Gene models - main
  applications:
   - mines
   - jbrowse-index
  prior_names:
   - arahy.Tifrunner.gnm2.ann2.gene_models_bare.gff3.gz
- name: arahy.Tifrunner.gnm2.ann2.PVFB.iprscan.gff3.gz
  description: InterPro functional information for genes (gff format)
- name: arahy.Tifrunner.gnm2.ann2.PVFB.legfed_v1_0.M65K.gfa.tsv.gz
  description: gene family assignments
- name: arahy.Tifrunner.gnm2.ann2.PVFB.mrna_lowqual.fna.gz
  description: transcript sequences - low quality or transposable elements
  prior_names:
   - arahy.Tifrunner.gnm2.ann2.mrna_lowqual.fna.gz
- name: arahy.Tifrunner.gnm2.ann2.PVFB.mrna.fna.gz
  description: Transcript sequences
  applications:
   - mines
  prior_names:
   - arahy.Tifrunner.gnm2.ann2.mrna.fna.gz
- name: arahy.Tifrunner.gnm2.ann2.PVFB.protein_lowqual.faa.gz
  description: protein sequence - low-quality or TE elements
  prior_names:
   - arahy.Tifrunner.gnm2.ann2.protein_lowqual.faa.gz
- name: arahy.Tifrunner.gnm2.ann2.PVFB.protein.faa.gz
  description: Protein sequences
  applications:
   - blast
   - mines
  prior_names:
   - arahy.Tifrunner.gnm2.ann2.protein.faa.gz